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CN09_15130 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_15130" - GcrA cell cycle regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_15130GcrA cell cycle regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (178 aa)    
Predicted Functional Partners:
hslO
33 kDa chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress (329 aa)
 
          0.777
CN09_16440
ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family (163 aa)
   
     
  0.762
CN09_15140
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (305 aa)
              0.744
CN09_06045
Transport permease protein; Derived by automated computational analysis using gene prediction method- Protein Homology (253 aa)
              0.744
rnd
Ribonuclease D; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides; Belongs to the RNase D family (381 aa)
              0.730
CN09_17035
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family (376 aa)
 
     
  0.720
CN09_27215
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
   
          0.712
CN09_17800
Heparinase; Derived by automated computational analysis using gene prediction method- Protein Homology (548 aa)
   
     
  0.707
secE
Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation (66 aa)
   
          0.692
CN09_27410
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (170 aa)
   
          0.689
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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