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CN09_15200 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_15200" - Dihydroorotate dehydrogenase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_15200Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (118 aa)    
Predicted Functional Partners:
pyrD
Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor (362 aa)
              0.961
CN09_15190
DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (221 aa)
 
          0.849
CN09_03210
Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
              0.790
CN09_11075
Arsenate reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (141 aa)
 
          0.778
CN09_15195
Signal peptide protein; Derived by automated computational analysis using gene prediction method- Protein Homology (142 aa)
              0.757
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (934 aa)
            0.752
CN09_16235
HAD family hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (282 aa)
 
          0.748
CN09_27555
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
              0.744
CN09_05655
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (186 aa)
              0.744
CN09_01885
5’-nucleotidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the 5’-nucleotidase family (681 aa)
              0.744
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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