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CN09_15335 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_15335" - LysR family transcriptional regulator in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_15335LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (305 aa)    
Predicted Functional Partners:
CN09_15340
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (402 aa)
 
          0.766
CN09_15345
Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
 
     
  0.714
CN09_15360
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (327 aa)
 
          0.700
CN09_15350
Histidinol dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (233 aa)
 
          0.695
CN09_15355
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the binding-protein-dependent transport system permease family (295 aa)
 
          0.676
CN09_15375
3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the 3-hydroxyisobutyrate dehydrogenase family (293 aa)
 
     
  0.663
CN09_15365
Choline dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (531 aa)
 
          0.620
CN09_15370
3-hydroxyisobutyryl-CoA hydrolase; Catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; Derived by automated computational analysis using gene prediction method- Protein Homology (352 aa)
         
  0.572
CN09_02740
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (303 aa)
   
          0.564
CN09_18980
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
   
          0.562
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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