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CN09_15720 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_15720" - Transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_15720Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (341 aa)    
Predicted Functional Partners:
CN09_28555
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (341 aa)
   
          0.761
CN09_15735
Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (387 aa)
 
 
 
  0.721
CN09_15740
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method- Protein Homology (550 aa)
 
   
  0.701
CN09_15725
Alpha-glucoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (453 aa)
 
     
  0.672
CN09_15730
Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (337 aa)
 
     
  0.611
CN09_03880
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method- Protein Homology (548 aa)
 
   
  0.552
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes (196 aa)
           
  0.548
CN09_01465
Beta-glucosidase; Derived by automated computational analysis using gene prediction method- Protein Homology (457 aa)
     
  0.478
CN09_15745
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (363 aa)
         
  0.411
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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