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CN09_15880 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_15880" - LysR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_15880LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)    
Predicted Functional Partners:
CN09_15885
Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (498 aa)
 
     
  0.728
CN09_18980
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
   
          0.612
CN09_03720
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (305 aa)
   
          0.602
CN09_31265
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (305 aa)
   
          0.593
CN09_13305
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (303 aa)
   
          0.552
CN09_32125
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)
   
          0.548
CN09_29485
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
   
          0.521
CN09_26670
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (291 aa)
   
          0.484
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
         
  0.472
CN09_27865
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (299 aa)
   
          0.469
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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