STRINGSTRING
CN09_15970 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_15970" - Antibiotic biosynthesis monooxygenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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[Homology]
Score
CN09_15970Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (117 aa)    
Predicted Functional Partners:
CN09_24345
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (259 aa)
   
          0.731
CN09_09030
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (264 aa)
   
          0.730
CN09_15975
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)
 
          0.728
CN09_23710
Succinoglycan biosynthesis protein exoh; Derived by automated computational analysis using gene prediction method- Protein Homology (370 aa)
   
          0.505
CN09_00620
Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (894 aa)
   
          0.505
CN09_03180
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (111 aa)
   
          0.496
CN09_00615
Glycoside hydrolase family 37; Derived by automated computational analysis using gene prediction method- Protein Homology (751 aa)
   
          0.491
CN09_08370
Acyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (380 aa)
   
          0.476
CN09_23730
Succinoglycan biosynthesis protein exov; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
   
          0.459
CN09_21990
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (356 aa)
 
          0.449
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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