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CN09_15975 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_15975" - LysR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_15975LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (295 aa)    
Predicted Functional Partners:
CN09_15970
Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (117 aa)
 
          0.728
CN09_16165
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
   
          0.573
ftsJ
Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit (239 aa)
              0.501
CN09_15980
Exopolyphosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (526 aa)
              0.501
CN09_18425
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
   
          0.487
CN09_21550
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (326 aa)
   
          0.475
CN09_01825
Glutamate synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1574 aa)
         
  0.472
CN09_21695
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)
   
          0.458
CN09_22450
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (265 aa)
   
          0.456
CN09_13580
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (305 aa)
   
          0.453
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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