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CN09_16085 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_16085" - Adenosylhomocysteinase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_16085Adenosylhomocysteinase; Derived by automated computational analysis using gene prediction method- Protein Homology (388 aa)    
Predicted Functional Partners:
CN09_17570
Recombinase RecB; Derived by automated computational analysis using gene prediction method- Protein Homology (1063 aa)
              0.983
CN09_17560
Chlorosome protein; Derived by automated computational analysis using gene prediction method- Protein Homology (503 aa)
              0.983
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
   
   
  0.979
CN09_04750
Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1258 aa)
   
   
  0.971
CN09_14685
S-adenosylmethionine synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the AdoMet synthase family (417 aa)
   
   
  0.884
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (432 aa)
   
   
  0.702
CN09_04915
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (341 aa)
   
 
  0.620
CN09_16080
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (308 aa)
         
  0.573
CN09_16065
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (245 aa)
         
  0.567
CN09_02210
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (660 aa)
   
 
  0.547
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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