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CN09_16250 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_16250" - LuxR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_16250LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (213 aa)    
Predicted Functional Partners:
CN09_16245
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (458 aa)
     
  0.989
CN09_24215
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (371 aa)
 
  0.932
CN09_03065
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (1129 aa)
     
 
  0.692
CN09_00240
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (487 aa)
 
 
  0.686
CN09_16265
Sodium-solute symporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the sodium-solute symporter (SSF) (TC 2.A.21) family (491 aa)
         
  0.614
CN09_16260
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (65 aa)
              0.601
CN09_19725
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (1199 aa)
 
 
 
  0.592
CN09_15420
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology (763 aa)
     
 
  0.558
CN09_30480
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
   
          0.526
CN09_33125
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)
 
 
 
  0.509
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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