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CN09_16395 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_16395" - LuxR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_16395LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (245 aa)    
Predicted Functional Partners:
CN09_03065
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (1129 aa)
 
 
 
  0.743
CN09_00240
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (487 aa)
 
 
  0.645
CN09_00350
Acyl-homoserine-lactone synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (224 aa)
 
     
  0.585
CN09_15420
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method- Protein Homology (763 aa)
     
 
  0.558
CN09_19725
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (1199 aa)
     
 
  0.527
CN09_15495
Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method- Protein Homology (314 aa)
 
     
  0.521
CN09_09725
Acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (169 aa)
 
 
 
  0.518
CN09_06440
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (2225 aa)
 
 
 
  0.494
CN09_14760
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (199 aa)
   
          0.485
CN09_33705
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
 
 
 
  0.484
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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