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trkD protein (Agrobacterium rhizogenes) - STRING interaction network
"trkD" - Probable potassium transport system protein kup in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
trkDProbable potassium transport system protein kup; Transport of potassium into the cell (633 aa)    
Predicted Functional Partners:
CN09_16300
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (606 aa)
 
 
 
  0.886
CN09_16405
Magnesium transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (325 aa)
         
  0.866
CN09_24130
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (230 aa)
         
  0.827
CN09_24135
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (903 aa)
         
  0.788
CN09_14455
Oxygen-independent coproporphyrinogen-III oxidase-like protein; Involved in the biosynthesis of porphyrin-containing compound (392 aa)
   
        0.750
CN09_17795
MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (469 aa)
              0.735
kdpA
Potassium-transporting ATPase potassium-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane (567 aa)
         
  0.720
CN09_11835
Cytochrome c-type biogenesis protein; Possible subunit of a heme lyase (151 aa)
              0.697
CN09_28260
Thiol-disulfide interchange protein CycY; Derived by automated computational analysis using gene prediction method- Protein Homology (203 aa)
              0.696
CN09_11840
Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method- Protein Homology (663 aa)
              0.696
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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