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CN09_16655 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_16655" - Ribonuclease H in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_16655Ribonuclease H; Derived by automated computational analysis using gene prediction method- Protein Homology (133 aa)    
Predicted Functional Partners:
CN09_31395
Amino acid transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (202 aa)
   
        0.760
pheT
Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily (807 aa)
              0.758
CN09_05380
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis (172 aa)
            0.752
CN09_12115
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (200 aa)
              0.652
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1234 aa)
              0.642
CN09_16650
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (203 aa)
              0.601
CN09_05535
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (420 aa)
              0.524
CN09_16645
Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (324 aa)
              0.479
CN09_16640
2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (476 aa)
              0.447
mraY
Phospho-N-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily (373 aa)
              0.416
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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