CN09_16680 protein (Agrobacterium rhizogenes)

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gene neighborhood

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textmining

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protein homology

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Score

CN09_16680

Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (333 aa)

Predicted Functional Partners:

CN09_12945

0.889

CN09_16670

0.881

CN09_16300

0.727

CN09_02265

0.621

CN09_05660

0.560

CN09_21310

0.500

CN09_13590

0.494

CN09_02660

0.476

CN09_16690

0.473

CN09_16695

0.472

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_02265	CN09_16300	Lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	0.802
CN09_02265	CN09_16680	Lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.621
CN09_02660	CN09_13590	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.420
CN09_02660	CN09_16300	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	0.838
CN09_02660	CN09_16680	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.476
CN09_05660	CN09_16680	Mechanosensitive ion channel protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.560
CN09_12945	CN09_16680	Phosphate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.889
CN09_13590	CN09_02660	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.420
CN09_13590	CN09_16680	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.494
CN09_16300	CN09_02265	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	Lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.802
CN09_16300	CN09_02660	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.838
CN09_16300	CN09_16680	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.727
CN09_16670	CN09_16680	Lysozyme; Derived by automated computational analysis using gene prediction method- Protein Homology	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.881
CN09_16670	CN09_16695	Lysozyme; Derived by automated computational analysis using gene prediction method- Protein Homology	Enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.412
CN09_16680	CN09_02265	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.621
CN09_16680	CN09_02660	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.476
CN09_16680	CN09_05660	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Mechanosensitive ion channel protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.560
CN09_16680	CN09_12945	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Phosphate transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	0.889
CN09_16680	CN09_13590	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.494
CN09_16680	CN09_16300	Transporter; Derived by automated computational analysis using gene prediction method- Protein Homology	Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family	0.727