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CN09_16725 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_16725" - Pirin in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_16725Pirin; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the pirin family (307 aa)    
Predicted Functional Partners:
CN09_16300
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the monovalent cation-proton antiporter 2 (CPA2) transporter (TC 2.A.37) family (606 aa)
              0.858
CN09_33210
Hydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0312 family (444 aa)
              0.763
xseB
Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family (83 aa)
              0.745
CN09_16735
Acetoin utilization protein; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
              0.734
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily (638 aa)
            0.656
CN09_31385
Aromatic ring-cleaving dioxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
 
   
  0.528
CN09_31790
Nuclease PIN; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the pirin family (254 aa)
 
        0.511
CN09_26030
N-methylproline demethylase; Derived by automated computational analysis using gene prediction method- Protein Homology (678 aa)
 
        0.426
CN09_23665
NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method- Protein Homology (186 aa)
 
        0.403
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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