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ctaB protein (Agrobacterium rhizogenes) - STRING interaction network
"ctaB" - Protoheme IX farnesyltransferase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily (319 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
   
   
  0.999
CN09_16830
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (296 aa)
 
 
  0.998
CN09_16855
Cytochrome B562; Derived by automated computational analysis using gene prediction method- Protein Homology (292 aa)
 
   
  0.992
CN09_16835
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (564 aa)
 
 
  0.991
ctaG
Cytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I (204 aa)
 
 
  0.983
ctaA
Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily (367 aa)
 
 
  0.973
CN09_12990
Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the heme-copper respiratory oxidase family (667 aa)
 
  0.965
CN09_20180
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the heme-copper respiratory oxidase family (592 aa)
 
 
  0.961
CN09_12980
Cytochrome O ubiquinol oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (133 aa)
 
   
  0.954
CN09_20175
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
 
 
  0.949
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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