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CN09_16920 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_16920" - Metal ABC transporter substrate-binding protein in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_16920Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial solute-binding protein 9 family (300 aa)    
Predicted Functional Partners:
CN09_16925
Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)
   
  0.987
CN09_16930
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (260 aa)
   
  0.973
CN09_33885
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (286 aa)
   
  0.934
CN09_33890
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (281 aa)
   
  0.904
CN09_33880
Manganese/iron transporter ATP-binding protein; With SitACD is involved in the transport of manganese and iron; Derived by automated computational analysis using gene prediction method- Protein Homology (279 aa)
   
  0.862
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
              0.846
CN09_15390
Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily (852 aa)
              0.798
CN09_08255
Multifunctional fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily (848 aa)
              0.798
CN09_11755
Electron transfer flavoprotein-ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (554 aa)
              0.795
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
         
  0.768
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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