CN09_17125 protein (Agrobacterium rhizogenes)

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_17125

Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology (101 aa)

Predicted Functional Partners:

CN09_33240

0.792

CN09_00560

0.789

CN09_33010

0.693

CN09_00515

0.692

CN09_26155

0.675

CN09_17170

0.672

CN09_29795

0.672

CN09_17130

0.529

CN09_12825

0.457

CN09_22625

0.438

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_00515	CN09_00560	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.714
CN09_00515	CN09_12825	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.537
CN09_00515	CN09_17125	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.692
CN09_00515	CN09_17170	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.778
CN09_00515	CN09_22625	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.561
CN09_00515	CN09_26155	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.697
CN09_00515	CN09_33240	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.698
CN09_00560	CN09_00515	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.714
CN09_00560	CN09_12825	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.483
CN09_00560	CN09_17125	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.789
CN09_00560	CN09_17170	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.673
CN09_00560	CN09_26155	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.707
CN09_00560	CN09_29795	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.699
CN09_00560	CN09_33010	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.713
CN09_12825	CN09_00515	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.537
CN09_12825	CN09_00560	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.483
CN09_12825	CN09_17125	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.457
CN09_12825	CN09_17170	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.508
CN09_12825	CN09_22625	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.454
CN09_12825	CN09_26155	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.455