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CN09_17195 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_17195" - Hemin transporter in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
CN09_17195Hemin transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (576 aa)    
Predicted Functional Partners:
CN09_17200
Invasion protein B; Derived by automated computational analysis using gene prediction method- Protein Homology (225 aa)
 
          0.944
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
         
  0.868
CN09_29690
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (247 aa)
 
   
  0.866
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (201 aa)
   
   
  0.775
kdpB
Potassium-transporting ATPase ATP-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily (696 aa)
     
        0.770
CN09_29685
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (888 aa)
 
     
  0.759
CN09_17190
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (175 aa)
              0.708
CN09_34570
Invasion protein B; Derived by automated computational analysis using gene prediction method- Protein Homology (223 aa)
 
          0.702
CN09_21195
Adenylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (732 aa)
              0.684
CN09_07195
Adenylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (619 aa)
              0.684
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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