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CN09_17255 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_17255" - Membrane protein in Agrobacterium rhizogenes
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_17255Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (517 aa)    
Predicted Functional Partners:
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
     
 
  0.999
CN09_17240
MoxR protein; Derived by automated computational analysis using gene prediction method- Protein Homology (316 aa)
 
   
  0.991
CN09_17245
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (174 aa)
 
     
  0.989
CN09_17250
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (329 aa)
   
0.989
CN09_17235
ATPase AAA; Derived by automated computational analysis using gene prediction method- Protein Homology (324 aa)
 
   
  0.987
CN09_17230
Arylsulfatase; Derived by automated computational analysis using gene prediction method- Protein Homology (548 aa)
 
     
  0.951
CN09_17270
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (338 aa)
 
 
 
  0.907
CN09_08270
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (572 aa)
         
  0.906
CN09_11755
Electron transfer flavoprotein-ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (554 aa)
         
  0.866
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (651 aa)
     
 
  0.858
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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