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CN09_17380 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_17380" - Proline dehydrogenase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_17380Proline dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (532 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
         
  0.797
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family (1234 aa)
         
  0.732
CN09_30555
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method- Protein Homology (337 aa)
 
     
  0.695
CN09_05350
GlcNAc-PI de-N-acetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (244 aa)
   
        0.663
CN09_26640
Dimethylarginine dimethylaminohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
              0.652
CN09_23730
Succinoglycan biosynthesis protein exov; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
              0.612
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose (480 aa)
              0.612
rlmJ
Ribosomal RNA large subunit methyltransferase J; Specifically methylates the adenine in position 2030 of 23S rRNA (283 aa)
              0.606
CN09_30470
Asparagine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (653 aa)
              0.593
CN09_17390
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (290 aa)
              0.532
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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