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CN09_17525 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_17525" - Transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
CN09_17525Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)    
Predicted Functional Partners:
CN09_17530
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (599 aa)
 
  0.990
CN09_28590
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (429 aa)
 
  0.965
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA (536 aa)
         
  0.918
CN09_17535
Serine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (150 aa)
         
  0.869
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (466 aa)
         
  0.827
CN09_15095
Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (408 aa)
 
  0.817
CN09_17540
PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method- Protein Homology (133 aa)
         
  0.815
CN09_17545
Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (91 aa)
         
  0.810
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
 
     
  0.800
CN09_17560
Chlorosome protein; Derived by automated computational analysis using gene prediction method- Protein Homology (503 aa)
     
      0.789
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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