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CN09_17530 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_17530" - Histidine kinase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
CN09_17530Histidine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (599 aa)    
Predicted Functional Partners:
CN09_17525
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (249 aa)
 
  0.990
CN09_17535
Serine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (150 aa)
 
     
  0.901
miaA
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family (298 aa)
         
  0.849
CN09_16980
Threonine synthase; Catalyzes the formation of L-threonine from O-phospho-L-homoserine; Derived by automated computational analysis using gene prediction method- Protein Homology (465 aa)
         
  0.836
CN09_17560
Chlorosome protein; Derived by automated computational analysis using gene prediction method- Protein Homology (503 aa)
 
          0.788
CN09_27510
Cell division protein FtsX; Derived by automated computational analysis using gene prediction method- Protein Homology (348 aa)
 
     
  0.756
CN09_17800
Heparinase; Derived by automated computational analysis using gene prediction method- Protein Homology (548 aa)
 
          0.731
CN09_04330
ATPase; Derived by automated computational analysis using gene prediction method- Protein Homology (459 aa)
 
 
 
  0.720
CN09_10335
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (169 aa)
 
     
  0.717
CN09_07930
ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (275 aa)
   
          0.700
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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