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CN09_18150 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_18150" - Glycosyl transferase family 1 in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_18150Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (374 aa)    
Predicted Functional Partners:
CN09_18160
Epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (323 aa)
 
 
  0.924
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (324 aa)
 
     
  0.917
CN09_18165
Transport permease protein; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
 
   
  0.903
CN09_18200
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (371 aa)
 
     
  0.841
cpsB
Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family (475 aa)
 
     
  0.838
CN09_18170
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (410 aa)
 
 
  0.811
CN09_12650
UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
 
 
  0.809
CN09_05185
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (361 aa)
 
     
  0.798
CN09_30470
Asparagine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (653 aa)
   
   
  0.759
CN09_25530
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (448 aa)
 
     
  0.701
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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