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CN09_18170 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_18170" - Sugar ABC transporter ATP-binding protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_18170Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (410 aa)    
Predicted Functional Partners:
CN09_18165
Transport permease protein; Derived by automated computational analysis using gene prediction method- Protein Homology (261 aa)
 
 
  0.990
cpsB
Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family (475 aa)
 
   
  0.970
CN09_01860
D-arabinose 5-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the SIS family. GutQ/KpsF subfamily (331 aa)
         
  0.954
CN09_18160
Epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology (323 aa)
 
   
  0.902
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (324 aa)
 
     
  0.898
CN09_18150
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method- Protein Homology (374 aa)
 
 
  0.811
CN09_25470
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (255 aa)
   
 
  0.747
ispDF
Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) (406 aa)
         
  0.739
CN09_05765
Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (614 aa)
   
 
  0.717
CN09_24520
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (679 aa)
 
 
  0.648
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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