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CN09_18360 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_18360" - Cysteine hydrolase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_18360Cysteine hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (228 aa)    
Predicted Functional Partners:
CN09_18365
Isochorismatase; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)
 
       
0.888
CN09_18370
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (610 aa)
        0.876
CN09_18355
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (381 aa)
              0.853
CN09_18350
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (273 aa)
              0.838
CN09_18345
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
              0.838
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (491 aa)
   
        0.833
CN09_00880
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (375 aa)
 
          0.684
CN09_18375
SgcQ protein; Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
              0.588
CN09_18380
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the FGGY kinase family (499 aa)
   
        0.575
CN09_23120
Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method- Protein Homology (369 aa)
              0.572
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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