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CN09_18365 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_18365" - Isochorismatase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
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[Homology]
Score
CN09_18365Isochorismatase; Derived by automated computational analysis using gene prediction method- Protein Homology (211 aa)    
Predicted Functional Partners:
CN09_18370
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (610 aa)
        0.894
CN09_18360
Cysteine hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (228 aa)
 
       
0.888
CN09_18355
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (381 aa)
              0.853
CN09_18350
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (273 aa)
              0.838
CN09_18345
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (304 aa)
              0.838
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (491 aa)
   
        0.833
CN09_30770
Amidase; Derived by automated computational analysis using gene prediction method- Protein Homology (198 aa)
   
          0.736
CN09_00880
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (375 aa)
 
          0.690
rutB
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB; In vivo, quickly hydrolyzes the ureidoacrylate peracid to avoid toxicity, but can also hydrolyzes ureidoacrylate that is formed spontaneously from ureidoacrylate peracid. One of the products of hydrolysis, carbamate, hydrolyzes spontaneously, thereby releasing one of the pyrimidine rings nitrogen atoms as ammonia and one of its carbons as CO2; Belongs to the isochorismatase family. RutB subfamily (246 aa)
   
          0.628
CN09_18375
SgcQ protein; Derived by automated computational analysis using gene prediction method- Protein Homology (266 aa)
              0.588
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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