CN09_19245 protein (Agrobacterium rhizogenes)

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Score

CN09_19245

Type IV secretion system protein VirB3; Derived by automated computational analysis using gene prediction method: Protein Homology (108 aa)

Predicted Functional Partners:

CN09_19240

0.972

CN09_19250

0.972

CN09_19255

0.969

CN09_19230

0.926

CN09_19225

0.895

CN09_19220

0.881

CN09_19215

0.869

CN09_19235

0.863

CN09_19210

0.784

CN09_12710

0.778

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_12710	CN09_19210	Type IV secretory pathway AvhB2 protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB11; ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.687
CN09_12710	CN09_19215	Type IV secretory pathway AvhB2 protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB10; Derived by automated computational analysis using gene prediction method: Protein Homology	0.836
CN09_12710	CN09_19220	Type IV secretory pathway AvhB2 protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	0.858
CN09_12710	CN09_19225	Type IV secretory pathway AvhB2 protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB8; Derived by automated computational analysis using gene prediction method: Protein Homology	0.665
CN09_12710	CN09_19230	Type IV secretory pathway AvhB2 protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB6; Derived by automated computational analysis using gene prediction method: Protein Homology	0.443
CN09_12710	CN09_19240	Type IV secretory pathway AvhB2 protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB4; Derived by automated computational analysis using gene prediction method: Protein Homology	0.823
CN09_12710	CN09_19245	Type IV secretory pathway AvhB2 protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB3; Derived by automated computational analysis using gene prediction method: Protein Homology	0.778
CN09_12710	CN09_19255	Type IV secretory pathway AvhB2 protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.751
CN09_19210	CN09_12710	Type IV secretion system protein VirB11; ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretory pathway AvhB2 protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.687
CN09_19210	CN09_19215	Type IV secretion system protein VirB11; ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB10; Derived by automated computational analysis using gene prediction method: Protein Homology	0.951
CN09_19210	CN09_19220	Type IV secretion system protein VirB11; ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	0.947
CN09_19210	CN09_19225	Type IV secretion system protein VirB11; ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB8; Derived by automated computational analysis using gene prediction method: Protein Homology	0.931
CN09_19210	CN09_19230	Type IV secretion system protein VirB11; ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB6; Derived by automated computational analysis using gene prediction method: Protein Homology	0.775
CN09_19210	CN09_19240	Type IV secretion system protein VirB11; ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB4; Derived by automated computational analysis using gene prediction method: Protein Homology	0.875
CN09_19210	CN09_19245	Type IV secretion system protein VirB11; ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB3; Derived by automated computational analysis using gene prediction method: Protein Homology	0.784
CN09_19210	CN09_19250	Type IV secretion system protein VirB11; ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system pilin subunit VirB2; Derived by automated computational analysis using gene prediction method: Protein Homology	0.714
CN09_19210	CN09_19255	Type IV secretion system protein VirB11; ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.879
CN09_19215	CN09_12710	Type IV secretion system protein VirB10; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretory pathway AvhB2 protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.836
CN09_19215	CN09_19210	Type IV secretion system protein VirB10; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB11; ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.951
CN09_19215	CN09_19220	Type IV secretion system protein VirB10; Derived by automated computational analysis using gene prediction method: Protein Homology	Type IV secretion system protein VirB9; Derived by automated computational analysis using gene prediction method: Protein Homology	0.979