CN09_19265 protein (Agrobacterium rhizogenes)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_19265

Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (78 aa)

Predicted Functional Partners:

CN09_19270

0.909

CN09_19300

0.544

CN09_12695

0.454

CN09_33000

0.446

CN09_12685

0.434

CN09_34540

0.430

CN09_19075

0.403

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_12685	CN09_12695	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method- Protein Homology	P-type DNA transfer protein VirB5; Derived by automated computational analysis using gene prediction method- Protein Homology	0.986
CN09_12685	CN09_19265	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.434
CN09_12695	CN09_12685	P-type DNA transfer protein VirB5; Derived by automated computational analysis using gene prediction method- Protein Homology	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method- Protein Homology	0.986
CN09_12695	CN09_19265	P-type DNA transfer protein VirB5; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.454
CN09_19075	CN09_19265	Endonuclease DDE; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.403
CN09_19075	CN09_19270	Endonuclease DDE; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.578
CN09_19075	CN09_19300	Endonuclease DDE; Derived by automated computational analysis using gene prediction method- Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.573
CN09_19075	CN09_33000	Endonuclease DDE; Derived by automated computational analysis using gene prediction method- Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.676
CN09_19075	CN09_34540	Endonuclease DDE; Derived by automated computational analysis using gene prediction method- Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.527
CN09_19265	CN09_12685	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method- Protein Homology	0.434
CN09_19265	CN09_12695	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	P-type DNA transfer protein VirB5; Derived by automated computational analysis using gene prediction method- Protein Homology	0.454
CN09_19265	CN09_19075	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Endonuclease DDE; Derived by automated computational analysis using gene prediction method- Protein Homology	0.403
CN09_19265	CN09_19270	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.909
CN09_19265	CN09_19300	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.544
CN09_19265	CN09_33000	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.446
CN09_19265	CN09_34540	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.430
CN09_19270	CN09_19075	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Endonuclease DDE; Derived by automated computational analysis using gene prediction method- Protein Homology	0.578
CN09_19270	CN09_19265	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	0.909
CN09_19270	CN09_19300	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.437
CN09_19270	CN09_33000	Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method- Protein Homology	0.410