CN09_19305 protein (Agrobacterium rhizogenes)

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second shell of interactors

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CN09_19305

Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology (115 aa)

Predicted Functional Partners:

CN09_19300

0.970

CN09_19310

0.935

CN09_34540

0.836

CN09_34550

0.682

CN09_12885

0.679

CN09_19270

0.679

CN09_22625

0.679

CN09_25960

0.672

CN09_32200

0.626

CN09_33000

0.576

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_12885	CN09_19270	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.685
CN09_12885	CN09_19300	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.458
CN09_12885	CN09_19305	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.679
CN09_12885	CN09_19310	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.673
CN09_12885	CN09_22625	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.648
CN09_12885	CN09_25960	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.533
CN09_12885	CN09_32200	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.603
CN09_12885	CN09_33000	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.634
CN09_12885	CN09_34540	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.665
CN09_19270	CN09_12885	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.685
CN09_19270	CN09_19300	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.437
CN09_19270	CN09_19305	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.679
CN09_19270	CN09_19310	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.680
CN09_19270	CN09_22625	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.402
CN09_19270	CN09_25960	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.528
CN09_19270	CN09_33000	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.410
CN09_19270	CN09_34540	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.708
CN09_19300	CN09_12885	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.458
CN09_19300	CN09_19270	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.437
CN09_19300	CN09_19305	Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology	Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.970