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CN09_19530 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_19530" - Conjugal transfer protein TrbL in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_19530Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method- Protein Homology (395 aa)    
Predicted Functional Partners:
CN09_19520
Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
 
     
  0.978
CN09_19535
Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method- Protein Homology (220 aa)
 
     
  0.962
CN09_19540
Conjugal transfer protein TrbG; Derived by automated computational analysis using gene prediction method- Protein Homology (270 aa)
 
     
  0.957
CN09_19545
Conjugal transfer protein TrbH; Derived by automated computational analysis using gene prediction method- Protein Homology (146 aa)
 
          0.953
CN09_19550
Conjugal transfer protein TrbI; Derived by automated computational analysis using gene prediction method- Protein Homology (432 aa)
 
     
  0.952
CN09_33670
Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method- Protein Homology (267 aa)
 
     
  0.905
CN09_19525
Transfer trbK protein; Derived by automated computational analysis using gene prediction method- Protein Homology (58 aa)
              0.845
CN09_33735
Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method- Protein Homology (187 aa)
 
          0.843
CN09_33660
Conjugal transfer protein TrbD; Derived by automated computational analysis using gene prediction method- Protein Homology (99 aa)
 
     
  0.842
CN09_19510
Conjugal transfer protein TrbD; Derived by automated computational analysis using gene prediction method- Protein Homology (99 aa)
 
     
  0.842
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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