Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CN09_02730 | CN09_19745 | Rna polymerase sigma 70; Belongs to the sigma-70 factor family | annotation not available | 0.906 |
CN09_02730 | CN09_19755 | Rna polymerase sigma 70; Belongs to the sigma-70 factor family | NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.714 |
CN09_03410 | CN09_19745 | Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.410 |
CN09_11095 | CN09_19745 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.407 |
CN09_12850 | CN09_19745 | annotation not available | annotation not available | 0.455 |
CN09_15250 | CN09_19745 | Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.782 |
CN09_19740 | CN09_19745 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | annotation not available | 0.457 |
CN09_19740 | CN09_19750 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.469 |
CN09_19740 | CN09_19755 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.492 |
CN09_19745 | CN09_02730 | annotation not available | Rna polymerase sigma 70; Belongs to the sigma-70 factor family | 0.906 |
CN09_19745 | CN09_03410 | annotation not available | Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.410 |
CN09_19745 | CN09_11095 | annotation not available | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.407 |
CN09_19745 | CN09_12850 | annotation not available | annotation not available | 0.455 |
CN09_19745 | CN09_15250 | annotation not available | Rrf2 family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.782 |
CN09_19745 | CN09_19740 | annotation not available | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.457 |
CN09_19745 | CN09_19750 | annotation not available | Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.454 |
CN09_19745 | CN09_19755 | annotation not available | NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.751 |
CN09_19745 | CN09_19760 | annotation not available | Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.664 |
CN09_19745 | CN09_31370 | annotation not available | Fmn-dependent nadh-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity | 0.451 |
CN09_19750 | CN09_19740 | Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.469 |
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