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CN09_20075 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_20075" - SpoVR family protein in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_20075SpoVR family protein; Derived by automated computational analysis using gene prediction method- Protein Homology (515 aa)    
Predicted Functional Partners:
CN09_20070
UPF0229 protein CN09_20070; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the UPF0229 family (422 aa)
 
 
  0.998
CN09_20065
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (648 aa)
 
   
  0.998
CN09_02135
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (62 aa)
     
        0.780
CN09_01135
Cell division protein Fic; Derived by automated computational analysis using gene prediction method- Protein Homology (198 aa)
     
        0.773
CN09_17845
DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the Dps family (169 aa)
     
        0.615
CN09_10865
Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method- Protein Homology (668 aa)
     
        0.615
smpB
SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a "tag peptide", a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] (159 aa)
           
  0.514
CN09_31785
Isochorismatase; Derived by automated computational analysis using gene prediction method- Protein Homology (196 aa)
   
        0.447
CN09_18480
Amidohydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (220 aa)
   
        0.447
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (491 aa)
              0.434
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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