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cutC protein (Agrobacterium rhizogenes) - STRING interaction network
"cutC" - Copper homeostasis protein CutC in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutCCopper homeostasis protein CutC; Participates in the control of copper homeostasis (236 aa)    
Predicted Functional Partners:
CN09_31890
Major facilitator transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (400 aa)
              0.999
CN09_20100
N-acetylglucosamine kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (308 aa)
 
     
  0.972
CN09_06240
Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)- malate; Belongs to the class-I fumarase family (535 aa)
         
  0.968
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (888 aa)
              0.948
CN09_13695
Beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method- Protein Homology (639 aa)
 
          0.902
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
              0.845
CN09_29325
N-acetylglucosamine-6-phosphate deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. NagA family (385 aa)
 
          0.821
CN09_23425
Glucokinase; Derived by automated computational analysis using gene prediction method- Protein Homology (345 aa)
 
     
  0.784
CN09_13640
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (386 aa)
 
          0.771
CN09_15770
6-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method- Protein Homology (232 aa)
         
  0.769
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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