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CN09_20195 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_20195" - Cytochrome C oxidase subunit IV in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
CN09_20195Cytochrome C oxidase subunit IV; Derived by automated computational analysis using gene prediction method- Protein Homology (110 aa)    
Predicted Functional Partners:
CN09_20190
Bb3-type cytochrome oxidase subunit IV; Derived by automated computational analysis using gene prediction method- Protein Homology (240 aa)
 
     
  0.989
CN09_20185
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (234 aa)
 
     
  0.987
CN09_20180
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the heme-copper respiratory oxidase family (592 aa)
 
     
  0.985
CN09_20175
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
 
     
  0.976
CN09_20165
Cytochrome C transmembrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (128 aa)
 
     
  0.702
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily (319 aa)
         
  0.654
ctaA
Heme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily (367 aa)
         
  0.654
CN09_05930
Zinc transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (313 aa)
              0.652
CN09_34225
Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (193 aa)
              0.561
CN09_20160
Cytochrome C oxidase subunit I; Derived by automated computational analysis using gene prediction method- Protein Homology (271 aa)
 
          0.471
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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