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CN09_20320 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_20320" - Beta alanine--pyruvate aminotransferase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
CN09_20320Beta alanine--pyruvate aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (444 aa)    
Predicted Functional Partners:
CN09_10375
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (369 aa)
 
     
  0.894
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (367 aa)
 
     
  0.836
CN09_20315
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (182 aa)
 
     
  0.797
CN09_15785
Glutamine synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the glutamine synthetase family (478 aa)
     
  0.652
CN09_15780
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (432 aa)
 
     
  0.629
CN09_22255
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (430 aa)
 
     
  0.593
CN09_00990
Amino acid oxidase; Derived by automated computational analysis using gene prediction method- Protein Homology (426 aa)
 
     
  0.577
CN09_01580
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (262 aa)
 
     
  0.571
CN09_03210
Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method- Protein Homology (437 aa)
   
   
  0.571
CN09_26565
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)
 
     
  0.566
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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