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CN09_20440 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_20440" - Acriflavin resistance protein in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
CN09_20440Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (352 aa)    
Predicted Functional Partners:
CN09_20450
ACR family transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1022 aa)
 
 
  0.976
CN09_20445
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (361 aa)
 
   
0.920
CN09_32990
ACR family transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1033 aa)
 
 
  0.847
CN09_19960
Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1049 aa)
 
 
  0.817
CN09_20435
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (209 aa)
 
     
  0.680
CN09_02755
Efflux pump membrane transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (1065 aa)
 
 
  0.630
CN09_31345
Efflux pump membrane transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (1051 aa)
 
 
  0.613
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (651 aa)
 
 
  0.613
CN09_29335
Efflux pump membrane transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (1059 aa)
 
 
  0.607
CN09_29005
Efflux pump membrane transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (1052 aa)
 
 
  0.593
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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