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CN09_20600 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_20600" - Acetylornithine deacetylase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_20600Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (440 aa)    
Predicted Functional Partners:
CN09_20605
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (516 aa)
 
     
  0.958
CN09_20625
Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method- Protein Homology (406 aa)
 
          0.910
CN09_20630
Peptidase; Derived by automated computational analysis using gene prediction method- Protein Homology (373 aa)
 
 
 
  0.875
CN09_20595
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (251 aa)
 
     
  0.859
CN09_20610
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (315 aa)
 
          0.743
CN09_20615
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (276 aa)
 
          0.741
CN09_20620
Peptide ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (545 aa)
 
          0.707
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde; Belongs to the NAGSA dehydrogenase family. Type 2 subfamily (310 aa)
   
   
  0.559
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl- L-glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily (295 aa)
   
   
  0.552
CN09_28140
Argininosuccinate synthase; Catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the argininosuccinate synthase family. Type 1 subfamily (407 aa)
   
 
  0.523
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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