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CN09_20715 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_20715" - Aldehyde dehydrogenase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
CN09_20715Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (475 aa)    
Predicted Functional Partners:
CN09_20705
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (204 aa)
         
  0.748
CN09_20710
Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (362 aa)
         
  0.741
CN09_20700
Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (357 aa)
         
  0.574
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
   
 
  0.512
CN09_23555
Ferredoxin; Derived by automated computational analysis using gene prediction method- Protein Homology (972 aa)
   
   
  0.499
CN09_20695
Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (273 aa)
         
  0.497
CN09_20690
Spermidine/putrescine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (293 aa)
              0.494
CN09_20720
MFS transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (416 aa)
     
 
  0.492
CN09_20725
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (212 aa)
   
 
  0.471
CN09_24995
Acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology (685 aa)
   
 
  0.421
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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