Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CN09_02865 | CN09_13995 | CN09_02865 | CN09_13995 | NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.685 |
CN09_02865 | lysA | CN09_02865 | CN09_20730 | NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine | 0.970 |
CN09_08715 | CN09_18630 | CN09_08715 | CN09_18630 | Serine protease; Belongs to the peptidase S1C family | annotation not available | 0.969 |
CN09_08715 | CN09_20940 | CN09_08715 | CN09_20940 | Serine protease; Belongs to the peptidase S1C family | Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.969 |
CN09_08715 | glpK | CN09_08715 | CN09_03750 | Serine protease; Belongs to the peptidase S1C family | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate | 0.969 |
CN09_08715 | lysA | CN09_08715 | CN09_20730 | Serine protease; Belongs to the peptidase S1C family | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine | 0.970 |
CN09_08715 | ribD | CN09_08715 | CN09_10375 | Serine protease; Belongs to the peptidase S1C family | 5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate | 0.719 |
CN09_11830 | CN09_18630 | CN09_11830 | CN09_18630 | Serine peptidase; Belongs to the peptidase S1C family | annotation not available | 0.969 |
CN09_11830 | CN09_20940 | CN09_11830 | CN09_20940 | Serine peptidase; Belongs to the peptidase S1C family | Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.969 |
CN09_11830 | glpK | CN09_11830 | CN09_03750 | Serine peptidase; Belongs to the peptidase S1C family | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate | 0.969 |
CN09_11830 | lysA | CN09_11830 | CN09_20730 | Serine peptidase; Belongs to the peptidase S1C family | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine | 0.970 |
CN09_11830 | ribD | CN09_11830 | CN09_10375 | Serine peptidase; Belongs to the peptidase S1C family | 5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate | 0.719 |
CN09_13910 | lysA | CN09_13910 | CN09_20730 | NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine | 0.970 |
CN09_13995 | CN09_02865 | CN09_13995 | CN09_02865 | NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | 0.685 |
CN09_13995 | lysA | CN09_13995 | CN09_20730 | NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine | 0.970 |
CN09_18630 | CN09_08715 | CN09_18630 | CN09_08715 | annotation not available | Serine protease; Belongs to the peptidase S1C family | 0.969 |
CN09_18630 | CN09_11830 | CN09_18630 | CN09_11830 | annotation not available | Serine peptidase; Belongs to the peptidase S1C family | 0.969 |
CN09_18630 | lysA | CN09_18630 | CN09_20730 | annotation not available | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine | 0.975 |
CN09_20940 | CN09_08715 | CN09_20940 | CN09_08715 | Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology | Serine protease; Belongs to the peptidase S1C family | 0.969 |
CN09_20940 | CN09_11830 | CN09_20940 | CN09_11830 | Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology | Serine peptidase; Belongs to the peptidase S1C family | 0.969 |
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