CN09_20760 protein (Agrobacterium rhizogenes)

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CN09_20760

RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily (196 aa)

Predicted Functional Partners:

CN09_20765

0.778

CN09_23245

0.703

CN09_20780

0.665

CN09_30315

0.654

CN09_20775

0.651

CN09_20770

0.649

CN09_20745

0.635

CN09_20885

0.627

CN09_30945

0.610

CN09_23250

0.569

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_20745	CN09_20760	Siderophore biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.635
CN09_20745	CN09_20765	Siderophore biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.852
CN09_20760	CN09_20745	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	Siderophore biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.635
CN09_20760	CN09_20765	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	Acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.778
CN09_20760	CN09_20770	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.649
CN09_20760	CN09_20775	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	Iron siderophore-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.651
CN09_20760	CN09_20780	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	0.665
CN09_20760	CN09_20885	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.627
CN09_20760	CN09_23245	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	Iron dicitrate transport regulator FecR; Derived by automated computational analysis using gene prediction method: Protein Homology	0.703
CN09_20760	CN09_23250	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	RNA polymerase sigma70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.569
CN09_20760	CN09_30315	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	Iron dicitrate transport regulator FecR; Derived by automated computational analysis using gene prediction method: Protein Homology	0.654
CN09_20760	CN09_30945	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology	0.610
CN09_20765	CN09_20745	Acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology	Siderophore biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.852
CN09_20765	CN09_20760	Acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.778
CN09_20765	CN09_20770	Acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology	Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.791
CN09_20765	CN09_20775	Acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology	Iron siderophore-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.791
CN09_20765	CN09_20780	Acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily	0.791
CN09_20765	CN09_20885	Acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology	C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	0.566
CN09_20770	CN09_20760	Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily	0.649
CN09_20770	CN09_20765	Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology	Acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology	0.791