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CN09_20880 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_20880" - C4-dicarboxylate ABC transporter permease in Agrobacterium rhizogenes
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_20880C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (428 aa)    
Predicted Functional Partners:
CN09_20890
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)
     
  0.988
CN09_20885
C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (172 aa)
 
   
  0.929
CN09_20875
Glutamate-1-semialdehyde aminotransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family (410 aa)
              0.853
CN09_29975
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)
              0.698
CN09_22360
Urea carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (1178 aa)
         
  0.684
CN09_32965
Acetyl-COA carboxylase; Derived by automated computational analysis using gene prediction method- Protein Homology (533 aa)
              0.681
CN09_20870
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate; Belongs to the type-II 3-dehydroquinase family (144 aa)
              0.671
CN09_03850
2-dehydro-3-deoxygluconokinase; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
         
  0.650
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
   
   
  0.642
CN09_07645
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)
              0.640
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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