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CN09_21125 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_21125" - GntR family transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_21125GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (236 aa)    
Predicted Functional Partners:
CN09_21110
Oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (448 aa)
     
  0.994
CN09_21120
Dihydrodipicolinate synthetase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the DapA family (303 aa)
     
  0.968
CN09_21115
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the aldehyde dehydrogenase family (505 aa)
     
  0.886
CN09_21085
Hydroxyproline-2-epimerase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the proline racemase family (332 aa)
 
     
  0.856
CN09_21105
Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (283 aa)
 
          0.781
CN09_21340
Catalyzes the formation of L-proline from pyrroline-5-carboxylate; Derived by automated computational analysis using gene prediction method- Protein Homology (256 aa)
              0.721
CN09_31705
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (231 aa)
   
          0.716
CN09_23055
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (231 aa)
   
          0.699
CN09_21675
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (214 aa)
   
          0.693
CN09_31885
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (229 aa)
   
          0.689
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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