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CN09_21230 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_21230" - Transcriptional regulator in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_21230Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (162 aa)    
Predicted Functional Partners:
CN09_27815
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (112 aa)
   
          0.765
CN09_23220
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (102 aa)
   
          0.656
CN09_21220
Catalyzes the release of sulfite from alkanesulfonates; Derived by automated computational analysis using gene prediction method- Protein Homology (377 aa)
              0.637
CN09_21225
ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (285 aa)
              0.632
CN09_21210
Aliphatic sulfonates import ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system (248 aa)
              0.632
CN09_21205
Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (316 aa)
              0.632
CN09_21215
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (277 aa)
              0.631
CN09_18255
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (101 aa)
   
          0.524
CN09_04750
Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1258 aa)
 
     
  0.418
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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