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CN09_21360 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_21360" - DNA gyrase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_21360DNA gyrase; Derived by automated computational analysis using gene prediction method- Protein Homology (288 aa)    
Predicted Functional Partners:
CN09_03380
2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (1107 aa)
   
 
  0.988
CN09_21385
Histone acetyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (180 aa)
 
     
  0.964
CN09_21380
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (325 aa)
 
          0.961
CN09_21370
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (95 aa)
 
     
  0.959
CN09_21375
Glycosyl transferase; Derived by automated computational analysis using gene prediction method- Protein Homology (385 aa)
 
   
  0.959
CN09_21395
Aliphatic nitrilase; Derived by automated computational analysis using gene prediction method- Protein Homology (350 aa)
 
 
  0.958
CN09_21390
Radical SAM protein; Derived by automated computational analysis using gene prediction method- Protein Homology (372 aa)
 
          0.956
CN09_21365
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (422 aa)
 
     
  0.952
CN09_21400
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (160 aa)
 
          0.899
CN09_10375
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (369 aa)
   
   
  0.868
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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