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CN09_21445 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_21445" - ABC transporter permease in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
CN09_21445ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (284 aa)    
Predicted Functional Partners:
CN09_21440
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (308 aa)
 
  0.972
CN09_21450
Glycerol-3-phosphate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the ABC transporter superfamily (355 aa)
 
  0.927
CN09_19870
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (307 aa)
 
  0.894
CN09_21435
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (404 aa)
 
 
 
  0.874
CN09_29205
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (322 aa)
 
  0.862
CN09_08435
Glycerol-3-phosphate transporter permease; With UgpEC is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method- Protein Homology (294 aa)
 
 
  0.837
CN09_25080
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (299 aa)
 
  0.835
CN09_03330
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (300 aa)
 
  0.829
CN09_29085
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (312 aa)
 
  0.827
CN09_23460
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (310 aa)
 
  0.824
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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