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CN09_21565 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_21565" - Sugar ABC transporter in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Databases
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[Homology]
Score
CN09_21565Sugar ABC transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (511 aa)    
Predicted Functional Partners:
CN09_21570
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (226 aa)
 
     
  0.951
CN09_21575
Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (210 aa)
 
        0.895
CN09_21560
Aminotriazole resistance protein; Derived by automated computational analysis using gene prediction method- Protein Homology (190 aa)
              0.866
CN09_21555
Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (237 aa)
 
        0.722
CN09_10375
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (369 aa)
              0.721
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (367 aa)
   
        0.700
CN09_30500
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (477 aa)
 
          0.582
CN09_25910
Peptidase M48; Derived by automated computational analysis using gene prediction method- Protein Homology (628 aa)
 
        0.571
CN09_22140
ATP-dependent Clp protease proteolytic subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the peptidase S14 family (295 aa)
 
     
  0.568
CN09_30495
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (487 aa)
 
     
  0.563
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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