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CN09_21995 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_21995" - Uncharacterized protein in Agrobacterium rhizogenes
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CN09_21995Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (125 aa)    
Predicted Functional Partners:
CN09_21990
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (356 aa)
 
          0.845
CN09_22010
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (172 aa)
 
          0.677
CN09_22005
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (226 aa)
 
          0.660
CN09_33200
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (131 aa)
   
          0.607
CN09_18830
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (131 aa)
   
          0.600
CN09_02855
Transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (163 aa)
 
          0.476
CN09_21980
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family (278 aa)
 
          0.441
CN09_00620
Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (894 aa)
   
          0.435
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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