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CN09_22025 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_22025" - NADH:flavin oxidoreductase in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_22025NADH-flavin oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (378 aa)    
Predicted Functional Partners:
CN09_02710
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (171 aa)
              0.744
parE
DNA topoisomerase 4 subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily (689 aa)
         
  0.720
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively (415 aa)
              0.711
CN09_22020
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (298 aa)
              0.608
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (494 aa)
   
   
  0.523
CN09_21020
NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (342 aa)
   
 
  0.504
lon
Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner (806 aa)
              0.503
CN09_18800
Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (229 aa)
       
  0.449
CN09_33175
Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method- Protein Homology (229 aa)
       
  0.448
CN09_15305
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (736 aa)
   
   
  0.430
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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