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CN09_22030 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_22030" - DNA mismatch repair protein MutT in Agrobacterium rhizogenes
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CN09_22030DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method- Protein Homology (172 aa)    
Predicted Functional Partners:
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
         
  0.718
CN09_22035
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method- Protein Homology (335 aa)
              0.675
CN09_15200
Dihydroorotate dehydrogenase; Derived by automated computational analysis using gene prediction method- Protein Homology (118 aa)
 
          0.574
nnrD
Multifunctional fusion protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration; Belongs to the NnrD/CARKD family (491 aa)
   
 
  0.522
CN09_22040
Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (342 aa)
              0.492
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (1000 aa)
         
  0.483
CN09_24730
Nuclease PIN; Derived by automated computational analysis using gene prediction method- Protein Homology (205 aa)
            0.481
CN09_02955
RNA methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology (276 aa)
 
      0.458
CN09_17785
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (72 aa)
   
          0.419
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (156 aa)
   
      0.417
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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