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CN09_22085 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_22085" - Cellulose synthase in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
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Databases
Textmining
[Homology]
Score
CN09_22085Cellulose synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (730 aa)    
Predicted Functional Partners:
CN09_22095
Endoglucanase; Derived by automated computational analysis using gene prediction method- Protein Homology (349 aa)
   
  0.970
CN09_22080
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (332 aa)
 
          0.967
CN09_22100
Cellulose synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (767 aa)
 
   
  0.940
CN09_12395
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method- Protein Homology (601 aa)
         
  0.789
CN09_15290
Hemagglutinin; Derived by automated computational analysis using gene prediction method- Protein Homology (1225 aa)
   
 
  0.739
CN09_22075
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (62 aa)
              0.538
dapE
Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily (397 aa)
     
 
  0.532
CN09_24525
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method- Protein Homology (578 aa)
 
     
  0.458
CN09_23675
Chain-length determining protein; Derived by automated computational analysis using gene prediction method- Protein Homology (783 aa)
 
     
  0.457
CN09_23725
Succinoglycan biosynthesis protein exow; Derived by automated computational analysis using gene prediction method- Protein Homology (319 aa)
 
 
  0.443
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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